PHATRDRAFT_7173 (Lumazine_synthase-I)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_7173	chr_6	(Lumazine_synthase-I)	101013	101441	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0194

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0123	0.20	1.1 4.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Lumazine_synthase-I		lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, LS), catalyzes the penultimate step in...	cl00317	182.645	1.85E-59	11 - 142	specific	187742
Lumazine_synthase-like superfamily		lumazine synthase and riboflavin synthase; involved in the riboflavin (vitamin B2) biosynthetic...	-	182.645	1.85E-59	11 - 142	superfamily	260349

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
19311		Not available	165914	283375	444779	Cre02.g088850.t1.2	AT2G44050.1	560112

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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