PHATRDRAFT_19661 pspa im30 family protein (PspA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_19661	chr_6	pspa im30 family protein (PspA)	389412	390496	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0164

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0046	0.37	0.0024 2700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ApoLp-III_like superfamily		Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the...	-	134.332	1.75E-37	56 - 280	superfamily	267466
PspA		Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal...	-	161.716	1.05E-47	56 - 280	multi-dom	224755

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32459		Not available	268075	246578	465242	Cre13.g583550.t1.2	AT1G65260.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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