PHATRDRAFT_50885 glycyl-trna synthetase (PRK04173)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50885 chr_7 glycyl-trna synthetase (PRK04173) 70959 72895 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0125

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0085
 0.45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain. GlyRS functions as a homodimer... cl00268 294.498 4.56E-95 81 - 478 specific 238397
class_II_aaRS-like_core superfamily Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA... - 294.498 4.56E-95 81 - 478 superfamily 260313
GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS... cl00266 183.143 8.24E-55 478 - 600 specific 238435
HGTP_anticodon superfamily HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl... - 183.143 8.24E-55 478 - 600 superfamily 260312
PRK04173 glycyl-tRNA synthetase; Provisional - 742.331 0 77 - 599 multi-dom 235240

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268398 Not available 230882 239754 Not available Not available Not available 253949

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments