PHATRDRAFT_45431 histone deacetylase superfamily (Arginase_HDAC superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45431 chr_7 histone deacetylase superfamily (Arginase_HDAC superfamily) 131608 135156 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0062

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0186
 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 101.691 1.16E-24 459 - 595 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 101.691 1.16E-24 459 - 595 superfamily 238125
SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... cl17250 48.7258 3.23E-07 113 - 156 specific 238096
SANT superfamily 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain... - 48.7258 3.23E-07 113 - 156 superfamily 266586
Arginase_HDAC superfamily Arginase-like and histone-like hydrolases; Arginase-like/histone-like hydrolase superfamily... - 268.996 1.33E-81 678 - 1148 superfamily 266496
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 65.3551 1.58E-12 502 - 603 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269060 Not available 161016 263567 461310 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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