PHATRDRAFT_45510 mgc53673 protein (AFD_class_I superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45510	chr_7	mgc53673 protein (AFD_class_I superfamily)	388207	390443	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0232

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0043	0.34	0.000000024 16000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AFD_class_I superfamily		Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the...	-	706.458	0	65 - 662	superfamily	266508
FAA1		Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	-	419.8	7.49E-138	17 - 663	multi-dom	223953

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	456684	Not available	Not available	491045

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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