PHATRDRAFT_45580 coronin 6 clipin e type c isoform 1 (DUF1900)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45580 chr_7 coronin 6 clipin e type c isoform 1 (DUF1900) 600104 601617 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0182

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0089
 0.28

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1900 superfamily Domain of unknown function (DUF1900); This domain is predominantly found in the structural protein... - 188.132 1.33E-57 264 - 400 superfamily 255124
DUF1900 superfamily Domain of unknown function (DUF1900); This domain is predominantly found in the structural protein... - 188.132 1.33E-57 264 - 400 superfamily 255124
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 110.888 1.02E-27 72 - 308 superfamily 238121
DUF1899 superfamily Domain of unknown function (DUF1899); This set of domains is found in various eukaryotic proteins.... - 68.8048 1.10E-14 4 - 65 superfamily 149883

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
8387 Not available 165730 70315 Not available Not available Not available 285516

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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