PHATRDRAFT_45592 spermidine putrescine abc transporter atp-binding subunit (PGDH_like_3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45592 chr_7 spermidine putrescine abc transporter atp-binding subunit (PGDH_like_3) 637343 638863 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0140

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0098
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PGDH_like_3 Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains; Phosphoglycerate... cl17240 312.188 3.92E-103 61 - 343 specific 240651
FDH_GDH_like superfamily Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related... - 312.188 3.92E-103 61 - 343 superfamily 266580
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 75.622 4.78E-17 358 - 432 superfamily 263730
SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] - 164.794 1.43E-46 45 - 345 multi-dom 223189

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268970 Not available 204281 196774 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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