1979 YbaK_likeThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
1979	chr_1	YbaK_like	2859199	2859886	-	YbaK_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445103	Thaps1979.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0040	0.39	0.032 0.41

Most Highly Correlated Transcripts

7655 hypothetical protein 0.8747	33919 MPC superfamily 0.8552	23818 hypothetical protein 0.8522	26991 GRX_GRXh_1_2_like 0.8483	21887 hypothetical protein 0.8479	25408 hypothetical protein 0.8479
23170 hypothetical protein 0.8371	268908 Trans_IPPS_HH 0.8355	261788 AdoMet_MTases 0.8347	37054 ascorbate_peroxidase 0.8331

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
YbaK_like		YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the...	cl00022	61.4049	1.76E-12	62 - 208	specific	239824
YbaK_like superfamily		YbaK-like. The YbaK family of deacylase domains includes the INS amino acid-editing domain of the...	-	61.4049	1.76E-12	62 - 208	superfamily	260143

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_23833	PHATRDRAFT_23833	177788	192277	56719	Cre07.g338250.t1.1	AT4G16510.1	565874

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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