268908 Trans_IPPS_HH
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268908 chr_5 Trans_IPPS_HH 1330355 1331534 - Trans_IPPS_HH
NCBI ID Ensembl Genomes exon ID
Not available Thaps268908.1, Thaps268908.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023
Normalized Mean Residue
Thaps_bicluster_0148
0.34
Trans_IPPS_HH
1
hypothetical protein
0.9471
TauD
0.943
hypothetical protein
0.9365
hypothetical protein
0.9362
hypothetical protein
0.9355
(atpE) ATP synthase CF1 epsilon subunit
0.9331
(atpB) ATP synthase CF1 beta subunit
0.933
PAP_fibrillin superfamily
0.932
CTP_transf_1
0.9289
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trans_IPPS_HH Trans-Isoprenyl Diphosphate Synthases, head-to-head; These trans-Isoprenyl Diphosphate Synthases (... cl00210 266.408 4.57E-87 30 - 301 specific 173831
Isoprenoid_Biosyn_C1 superfamily Isoprenoid Biosynthesis enzymes, Class 1; Superfamily of trans-isoprenyl diphosphate synthases (... - 266.408 4.57E-87 30 - 301 superfamily 260263
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41878 PHATRDRAFT_41878 212202 295181 Not available Cre02.g095092.t1.1 AT5G17230.2 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0009058 GO:0016740 GO:0004659 GO:0004660 GO:0004661 GO:0004662 GO:0004663 GO:0008318 GO:0008412 GO:0008495 GO:0046428 -

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

transferase activity

Details: 
Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
GO Category: 
MF

prenyltransferase activity

Details: 
Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).
GO Category: 
MF

protein farnesyltransferase activity

Details: 
Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.
GO Category: 
MF

protein geranylgeranyltransferase activity

Details: 
Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.
GO Category: 
MF

CAAX-protein geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families.
GO Category: 
MF

Rab geranylgeranyltransferase activity

Details: 
Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.
GO Category: 
MF

protein prenyltransferase activity

Details: 
Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.
GO Category: 
MF

4-hydroxybenzoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: farnesylfarnesylgeranyl diphosphate + p-hydroxybenzoate = 3-octaprenyl-4-hydroxybenzoate + diphosphate.
GO Category: 
MF

protoheme IX farnesyltransferase activity

Details: 
Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme o + diphosphate.
GO Category: 
MF

1,4-dihydroxy-2-naphthoate octaprenyltransferase activity

Details: 
Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = dimethylmenaquinone + diphosphate + CO2.
GO Category: 
MF
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