PHATRDRAFT_5311 proteasome subunit beta 7 (proteasome_beta_type_7)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_5311	chr_8	proteasome subunit beta 7 (proteasome_beta_type_7)	133443	134045	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0183

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0125	0.29	3.9 3700

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
proteasome_beta_type_7		proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the...	cl00467	328.002	6.25E-115	8 - 194	specific	239732
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	328.002	6.25E-115	8 - 194	superfamily	260443
PRE1		20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,...	-	163.623	6.71E-50	4 - 201	multi-dom	223711

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
264377		Not available	268646	300236	443432	Cre10.g424400.t1.2	AT5G40580.2	554337

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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