PHATRDRAFT_45914 dsb repair complex subunit (KU superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45914	chr_8	dsb repair complex subunit (KU superfamily)	653913	656384	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0049

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
KU superfamily		Ku-core domain; includes the central DNA-binding beta-barrels, polypeptide rings, and the C-...	-	141.264	2.48E-37	359 - 658	superfamily	261400
SAP		SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain...	cl02640	46.2212	1.42E-06	699 - 725	specific	251054
SAP superfamily		SAP domain; The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain...	-	46.2212	1.42E-06	699 - 725	superfamily	261387

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
263010		Not available	235894	13220	Not available	Not available	AT1G16970.1	484094

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments