Phatr_hclust_0049 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006303 double-strand break repair via nonhomologous end-joining 0.00345508 1 Phatr_hclust_0049
GO:0006821 chloride transport 0.0120481 1 Phatr_hclust_0049
GO:0000074 regulation of cell cycle 0.0573612 1 Phatr_hclust_0049
GO:0006418 tRNA aminoacylation for protein translation 0.08657 1 Phatr_hclust_0049
GO:0005975 carbohydrate metabolism 0.104035 1 Phatr_hclust_0049
GO:0006810 transport 0.287164 1 Phatr_hclust_0049
GO:0006355 regulation of transcription, DNA-dependent 0.322627 1 Phatr_hclust_0049

Members

PHATRDRAFT_29502 : (CPSF_A)
PHATRDRAFT_49817 : cables2-prov protein
PHATRDRAFT_16856 : (Glyco_hydro_1)
PHATRDRAFT_38095 : cl-voltage gated (Voltage_gated_ClC)
PHATRDRAFT_45873 :
PHATRDRAFT_36956 :
PHATRDRAFT_38946 : cysteine desulfurase (csdA)
PHATRDRAFT_41029 :
PHATRDRAFT_49402 :
PHATRDRAFT_40382 : mosc domain containing protein (MOSC superfamily)
PHATRDRAFT_43525 : (APC_CDC26)
PHATRDRAFT_47113 : riken cdnaisoform cra_a
PHATRDRAFT_49553 :
PHATRDRAFT_12523 : solute carrier family 25 (mitochondrial carrier ornithine transporter) member 15 (Mito_carr)
PHATRDRAFT_49256 :
PHATRDRAFT_48390 : (DUF3608 superfamily)
PHATRDRAFT_54072 : uvh6 (ultraviolet hypersensitive 6) atp binding atp-dependent dna helicase atp-dependent helicase dna binding acting on acidin phosphorus-containing anhydrides nucleic acid binding (rad3)
PHATRDRAFT_41174 : growth response protein
PHATRDRAFT_25 : (COG1204)
PHATRDRAFT_35903 :
PHATRDRAFT_54175 : rna polymerase iii 80 kda subunit rpc5 (Sin_N superfamily)
PHATRDRAFT_3366 : n-ethylmaleimide-sensitive factor nsf sec18p (AAA)
PHATRDRAFT_43230 :
PHATRDRAFT_44952 : transcription factor protein (Rtt106)
PHATRDRAFT_45914 : dsb repair complex subunit (KU superfamily)
PHATRDRAFT_43708 : mgc82689 protein (SET)
PHATRDRAFT_33072 : superkiller viralicidic activity 2-like 2 (DSHCT)
PHATRDRAFT_50325 : lipopolysaccharide core biosynthesis protein (CAP10 superfamily)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.199 0.324104
Copper_SH Copper_SH 0.119 0.197923
Green_vs_Red_24h Green_vs_Red_24h -0.042 0.742623
Silver_SH Silver_SH 0.255 0.00608108
Cadmium_1.2mg Cadmium_1.2mg -0.042 0.592652
BlueLight_24h BlueLight_24h -0.016 0.968444
GreenLight_0.5h GreenLight_0.5h -0.834 0.00884354
RedLight_6h RedLight_6h -0.049 0.834744
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.980594
GreenLight_24h GreenLight_24h -0.065 0.747514
light_6hr light_6hr -0.292 0.147222
dark_8hr_light_3hr dark_8hr_light_3hr -0.158 0.41155
Blue_vs_Green_6h Blue_vs_Green_6h -0.004 0.966429
Ammonia_SH Ammonia_SH -0.660 0.010396
Simazine_SH Simazine_SH 0.485 0.000423729
Oil_SH Oil_SH -0.087 0.327135
Salinity_15ppt_SH Salinity_15ppt_SH 0.135 0.194018
Cadmium_SH Cadmium_SH 0.150 0.159385
Blue_vs_Red_24h Blue_vs_Red_24h 0.007 0.964444
highlight_0to6h highlight_0to6h -0.063 0.774545
BlueLight_0.5h BlueLight_0.5h -1.061 0.00633333
Dispersant_SH Dispersant_SH 0.085 0.384604
light_16hr_dark_4hr light_16hr_dark_4hr -0.186 0.0904523
light_15.5hr light_15.5hr -0.379 0.0781081
light_10.5hr light_10.5hr -0.178 0.48607
Dispersed_oil_SH Dispersed_oil_SH -0.232 0.0289189
Si_free Si_free 0.003 0.988477
Re-illuminated_0.5h Re-illuminated_0.5h -0.934 0.00628931
Mixture_SH Mixture_SH -0.385 0.139524
Blue_vs_Red_6h Blue_vs_Red_6h 0.105 0.608123
light_16hr_dark_30min light_16hr_dark_30min -0.232 0.296502
BlueLight_6h BlueLight_6h 0.056 0.751306
highlight_12to48h highlight_12to48h -0.231 0.1952
RedLight_24h RedLight_24h -0.023 0.886403
Dark_treated Dark_treated 1.078 0.0262162
GreenLight_6h GreenLight_6h 0.061 0.749765
Cadmium_0.12mg Cadmium_0.12mg 0.027 0.503102
Blue_vs_Green_24h Blue_vs_Green_24h 0.049 0.514258
RedLight_0.5h RedLight_0.5h -0.335 0.34395
Green_vs_Red_6h Green_vs_Red_6h 0.110 0.603815
Re-illuminated_24h Re-illuminated_24h 0.014 0.932298

Motifs

MEME Output