PHATRDRAFT_12394 low-co2-inducible protein (NSA2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12394	chr_8	low-co2-inducible protein (NSA2)	776705	777487	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0243

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0214	0.23	0.00000000001 0.00000000023

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NSA2		pre-ribosomal protein NSA2 (Nop seven-associated 2); NSA2 appears to be a protein required for the...	cl00880	473.263	3.77E-170	4 - 260	specific	211393
Ribosomal_S8e_like superfamily		Eukaryotic/archaeal ribosomal protein S8e and similar proteins; This family contains the eukaryotic...	-	473.263	3.77E-170	4 - 260	superfamily	260676

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28755		Not available	268585	302107	96880	Cre12.g507300.t1.2	AT5G06360.1	351148

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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