PHATRDRAFT_54534 tba2_pelfatubulin alpha-2 chain (PLN00221)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54534	chr_9	tba2_pelfatubulin alpha-2 chain (PLN00221)	509325	511016	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0196	0.27	19000 33000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
alpha_tubulin		The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and...	cl10017	903.584	0	2 - 435	specific	100015
Tubulin_FtsZ superfamily		Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well...	-	903.584	0	2 - 435	superfamily	263945
PLN00221		tubulin alpha chain; Provisional	-	951.174	0	1 - 451	multi-dom	177802

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
29304		Not available	272136	235379	200410	Cre04.g216850.t1.2	AT4G14960.1	340566

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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