PHATRDRAFT_20608 polyribonucleotide nucleotidyltransferase (PRK11824)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20608 chr_9 polyribonucleotide nucleotidyltransferase (PRK11824) 665014 667560 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0396

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNase_PH_PNPase_2 Polyribonucleotide nucleotidyltransferase, repeat 2; Polyribonucleotide nucleotidyltransferase (... cl03114 385.361 3.77E-128 398 - 625 specific 206769
RNase_PH superfamily RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'... - 302.514 2.70E-96 89 - 306 superfamily 261591
RNase_PH superfamily RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'... - 302.514 2.70E-96 89 - 306 superfamily 261591
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 69.8788 1.96E-14 705 - 781 superfamily 263921
KH-I superfamily K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide... - 61.0134 2.04E-11 634 - 694 superfamily 266583
PRK11824 polynucleotide phosphorylase/polyadenylase; Provisional - 894.405 0 89 - 785 multi-dom 236995

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268644 Not available 185873 318796 465631 Cre04.g214501.t1.1 AT5G14580.1 537335

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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