PHATRDRAFT_20716 rna binding motif protein 8 (RRM_RBM8)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20716 chr_9 rna binding motif protein 8 (RRM_RBM8) 916342 916758 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0206

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0021
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_RBM8 RNA recognition motif in RNA-binding protein RBM8A, RBM8B nd similar proteins; This subfamily... cl17169 162.772 2.32E-52 38 - 125 specific 240770
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 162.772 2.32E-52 38 - 125 superfamily 266524
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 67.6646 1.66E-14 37 - 123 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
18841 Not available 270812 301474 413981 Cre12.g526750.t1.2 AT1G51510.1 317912

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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