PHATRDRAFT_42913 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_42913	chr_1		1501135	1503033	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0193

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0020	0.35	0.029 0.24

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Biotinyl_lipoyl_domains superfamily		Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the...	-	39.41	0.000310716	73 - 153	superfamily	264355
SEEEED superfamily		Serine-rich region of AP3B1, clathrin-adaptor complex; This short low-complexity, highly serine-...	-	37.6727	0.00562224	279 - 338	superfamily	267561

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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