PHATRDRAFT_38881 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_38881	chr_17		436393	438376	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0243

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0230	0.25	25000 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RRM_SF		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	cl17169	36.1289	0.00333785	470 - 558	specific	240668
RRM_SF superfamily		RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (...	-	36.1289	0.00333785	470 - 558	superfamily	266524

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22840		Not available	258633	28293	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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