20595 Choline_transpo
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20595 chr_1 Choline_transpo 255382 257056 - Choline_transpo

Synonyms

NCBI ID Ensembl Genomes exon ID
7445270 Thaps20595.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0143

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0028
 0.44

Most Highly Correlated Transcripts

bd1808

(bd1808) NA
0.9584

bd1793

(bd1793) NA
0.9505

bd410

(bd410) HNHc
0.9085

bd1841

(bd1841) CAP10 superfamily
0.9001

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8992

6729

FUSC_2
0.8723

bd1786

(bd1786) GLTP superfamily
0.8719

bd1941

(bd1941) NA
0.8671

25846

PDI_a_family
0.8667

21411

hypothetical protein
0.864

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Choline_transpo superfamily Plasma-membrane choline transporter; This family represents a high-affinity plasma-membrane choline... - 189.349 7.55E-55 185 - 509 superfamily 252644
Choline_transpo superfamily Plasma-membrane choline transporter; This family represents a high-affinity plasma-membrane choline... - 189.349 7.55E-55 185 - 509 superfamily 252644

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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