6729 FUSC_2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6729	chr_7	FUSC_2	338213	340793	+	FUSC_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446194	Thaps6729.1, Thaps6729.3, Thaps6729.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0172

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0036	0.41

Most Highly Correlated Transcripts

25944 p450 superfamily 0.9065	6066 APG6 0.9047	8510 hypothetical protein 0.8958	21411 hypothetical protein 0.8938	29322 AAT_I superfamily 0.8936	11300 hypothetical protein 0.8879
20868 hypothetical protein 0.8874	9364 hypothetical protein 0.8851	4333 hypothetical protein 0.8839	22297 VPS9 superfamily 0.8779

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
FUSC_2		Fusaric acid resistance protein-like; Fusaric acid resistance protein-like.	cl19401	60.6866	7.60E-11	406 - 525	specific	257835
FUSC_2 superfamily		Fusaric acid resistance protein-like; Fusaric acid resistance protein-like.	-	60.6866	7.60E-11	406 - 525	superfamily	267754

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	233298	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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