ThpsCt006 (trnW(cca)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt006	chloroplast	(trnW(cca))	24921	24993	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524746	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0061

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0021	0.47	0.21 12000

Most Highly Correlated Transcripts

ThpsCp126 (thiG) thiamin biosynthesis protein G 0.7838	ThpsCp030 (rpl12) ribosomal protein L12 0.7823	9918 hypothetical protein 0.769	22694 Mpv17_PMP22 0.763	bd1545 (bd1545) psbC 0.7626	ThpsCp038 (ycf3) photosystem I assembly protein Ycf3 0.753
268270 Patched 0.7478	bd1112 (bd1112) NA 0.7455	270361 hypothetical protein 0.7451	ThpsCp028 (rpl11) ribosomal protein L11 0.7419

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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