ThpsCt010 (trnD(guc)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt010	chloroplast	(trnD(guc))	49844	49968	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524778	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd1720 (bd1720) ftsH 0.9372	ThpsCt023 (trnQ(uug)) 0.9359	bd1304 (bd1304) Ycf4 0.9294	bd1313 (bd1313) psbH 0.9283	bd1380 (bd1380) ycf39 0.9279	bd1387 (bd1387) psbE 0.9273
bd466 (bd466) cytochrome_b_C 0.9223	bd1403 (bd1403) NA 0.9158	bd1378 (bd1378) atpI 0.9131	bd467 (bd467) Cytochrome_b_N 0.9116

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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