ThpsCt028 (trnL(uag)') Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt028	chloroplast	(trnL(uag)')	121361	121442	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524830	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0336

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0020	0.47	9500 1

Most Highly Correlated Transcripts

ThpsCt021 (trnL(uag)) 0.9734	ThpsCp138 (rbcR) LysR transcriptional regulator 0.8441	bd1258 (bd1258) fer2 0.7557	ThpsCp113 (secY) preprotein translocase subunit SecY 0.7424	ThpsCp122 (rps7) ribosomal protein S7 0.7353	ThpsCp078 (rbcR) LysR transcriptional regulator 0.7198
ThpsCp116 (rps11) ribosomal protein S11 0.7193	25124 hypothetical protein 0.714	ThpsCp115 (rps13) ribosomal protein S13 0.7124	ThpsCp118 (rpl13) ribosomal protein L13 0.7122

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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