20848 SEC14
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20848 chr_1 SEC14 1632263 1635795 + SEC14

Synonyms

NCBI ID Ensembl Genomes exon ID
7445276 Thaps20848.2, Thaps20848.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0468

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0023
 0.43

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.8542

bd381

(bd381) NA
0.8425

bd933

(bd933) NA
0.8072

bd453

(bd453) Mito_carr
0.8029

bd1840

(bd1840) NA
0.7868

bd1692

(bd1692) NA
0.7822

bd196

(bd196) Snf7 superfamily
0.7802

bd1875

(bd1875) NA
0.7742

2004

hypothetical protein
0.773

17312

PLN02664
0.7716

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SEC14 Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae... cl15787 77.8106 3.05E-16 756 - 889 specific 238099
SEC14 superfamily Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae... - 77.8106 3.05E-16 756 - 889 superfamily 265785

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 244492 325937 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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