20970 SpoVKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20970	chr_1	SpoVK	2273997	2277013	-	SpoVK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449031	Thaps20970.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0301

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0170	0.34	1200 270

Most Highly Correlated Transcripts

25783 hypothetical protein 0.8518	21558 hypothetical protein 0.8456	bd877 (bd877) NA 0.8419	23511 hypothetical protein 0.8399	22953 hypothetical protein 0.8393	bd1877 (bd1877) NA 0.8378
21613 hypothetical protein 0.8372	20989 hypothetical protein 0.8331	22218 hypothetical protein 0.8327	23335 hypothetical protein 0.83

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SpoVK		ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]	-	84.8752	2.78E-17	675 - 941	multi-dom	223540

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	233398	442264	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 -

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