23335 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23335 chr_7 hypothetical protein 109265 111572 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7450639 Thaps23335.2, Thaps23335.3, Thaps23335.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0481

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0082
 0.46

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.9207

bd690

(bd690) NA
0.9173

bd738

(bd738) NA
0.9137

bd1801

(bd1801) NA
0.9116

bd1692

(bd1692) NA
0.8907

bd1934

(bd1934) NA
0.8839

bd1840

(bd1840) NA
0.8733

bd1946

(bd1946) NA
0.8644

21316

hypothetical protein
0.8596

bd877

(bd877) NA
0.8559

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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