Phatr_hclust_0221 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006366 | transcription from RNA polymerase II promoter | 0.00444554 | 1 | Phatr_hclust_0221 |
| GO:0009088 | threonine biosynthesis | 0.0132807 | 1 | Phatr_hclust_0221 |
| GO:0006304 | DNA modification | 0.0220418 | 1 | Phatr_hclust_0221 |
| GO:0006268 | DNA unwinding | 0.0220418 | 1 | Phatr_hclust_0221 |
| GO:0006265 | DNA topological change | 0.0393439 | 1 | Phatr_hclust_0221 |
| GO:0006350 | transcription | 0.0895323 | 1 | Phatr_hclust_0221 |
| GO:0006397 | mRNA processing | 0.0976524 | 1 | Phatr_hclust_0221 |
| GO:0006520 | amino acid metabolism | 0.101687 | 1 | Phatr_hclust_0221 |
| GO:0006468 | protein amino acid phosphorylation | 0.176419 | 1 | Phatr_hclust_0221 |
| GO:0009058 | biosynthesis | 0.182574 | 1 | Phatr_hclust_0221 |
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PHATRDRAFT_23838 : (COG0714) |
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PHATRDRAFT_8457 : (RRM_SF superfamily) |
PHATRDRAFT_41071 : methyltransferase type 12 (AdoMet_MTases) |
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PHATRDRAFT_7293 : snat_bovin serotonin n-acetyltransferase (RimI) |
PHATRDRAFT_23798 : kelch repeat-containing protein (DUF4110) |
PHATRDRAFT_2171 : nitrate transporter (2A0108) |
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PHATRDRAFT_7294 : snat_bovin serotonin n-acetyltransferase (RimI) |
PHATRDRAFT_44031 : riken cdnaisoform cra_c |
PHATRDRAFT_47879 : (SH2_2) |
PHATRDRAFT_50465 : (Smc) |
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PHATRDRAFT_49558 : tetratricopeptide tpr_2 (HSF_DNA-bind) |
PHATRDRAFT_15555 : (PRK08566) |
PHATRDRAFT_1241 : dna topoisomerase i (TOP1Ac) |
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PHATRDRAFT_43880 : (LRR_RI superfamily) |
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PHATRDRAFT_49056 : threonine synthase (PRK09225) |
PHATRDRAFT_48446 : lysosomal acid phosphatase 2 (HP_HAP_like) |
PHATRDRAFT_3686 : (AAA) |
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PHATRDRAFT_13864 : lsm (like-sm) domain-containing protein (Sm_D3) |
PHATRDRAFT_1875 : calcium-dependent calmodulin-independent protein kinase cdpk (S_TKc) |
PHATRDRAFT_44134 : copper resistance b precursor |
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PHATRDRAFT_10539 : atpk19 atpk2 (arabidopsis thaliana serine threonine protein kinasearabidopsis thaliana serine threonine protein kinase 2) kinase (STKc_AGC) |
PHATRDRAFT_52468 : p type cation copper-transporter (ZntA) |
PHATRDRAFT_50408 : mitochondrial inner membrane transporter ymc1 (Mito_carr) |
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PHATRDRAFT_48958 : spou protein (SpoU_methylase) |
PHATRDRAFT_4342 : mitochondrial carrier (Mito_carr) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | 0.048 | 0.834035 |
| Copper_SH | Copper_SH | -0.439 | 0.000515464 |
| Green_vs_Red_24h | Green_vs_Red_24h | -0.067 | 0.511268 |
| Silver_SH | Silver_SH | -0.457 | 0.000555556 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.052 | 0.398133 |
| BlueLight_24h | BlueLight_24h | 0.158 | 0.215318 |
| GreenLight_0.5h | GreenLight_0.5h | 0.316 | 0.270404 |
| RedLight_6h | RedLight_6h | -0.005 | 0.9857 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.176 | 0.129795 |
| light_6hr | light_6hr | -0.396 | 0.0199405 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.209 | 0.1768 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.002 | 0.975758 |
| Ammonia_SH | Ammonia_SH | 2.900 | 0.000344828 |
| Simazine_SH | Simazine_SH | -0.453 | 0.000423729 |
| Oil_SH | Oil_SH | 0.602 | 0.000666667 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.175 | 0.0628151 |
| Cadmium_SH | Cadmium_SH | 0.588 | 0.000666667 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | -0.085 | 0.483333 |
| highlight_0to6h | highlight_0to6h | 0.171 | 0.112579 |
| BlueLight_0.5h | BlueLight_0.5h | 0.435 | 0.220189 |
| Dispersant_SH | Dispersant_SH | 0.125 | 0.139718 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.146 | 0.106912 |
| light_15.5hr | light_15.5hr | -0.127 | 0.541098 |
| light_10.5hr | light_10.5hr | -0.387 | 0.0380368 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.594 | 0.000675676 |
| Si_free | Si_free | 0.136 | 0.271605 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 0.451 | 0.163415 |
| Mixture_SH | Mixture_SH | 3.168 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.009 | 0.985113 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.092 | 0.65884 |
| BlueLight_6h | BlueLight_6h | 0.004 | 0.989796 |
| highlight_12to48h | highlight_12to48h | 0.330 | 0.0159091 |
| RedLight_24h | RedLight_24h | 0.243 | 0.0404959 |
| Dark_treated | Dark_treated | 0.029 | 0.953455 |
| GreenLight_6h | GreenLight_6h | 0.002 | 0.9901 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.027 | 0.426844 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | -0.018 | 0.828005 |
| RedLight_0.5h | RedLight_0.5h | 0.373 | 0.199134 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.007 | 0.968763 |
| Re-illuminated_24h | Re-illuminated_24h | 0.281 | 0.00206186 |
