21326 Ras_like_GTPase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21326 chr_2 Ras_like_GTPase superfamily 1259702 1263204 + Ras_like_GTPase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444686 Thaps21326.1, Thaps21326.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0153

Most Highly Correlated Transcripts

bd446

(bd446) HrpA
0.9062

bd392

(bd392) DEXDc
0.9001

bd1949

(bd1949) NA
0.8981

24562

hypothetical protein
0.894

3660

COG5038
0.8936

263483

CHD
0.8917

3719

DECH_helic
0.888

8384

hypothetical protein
0.8855

263019

PLN02818
0.885

23130

NT_PAP_TUTase
0.8842

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 246.371 1.81E-73 572 - 860 superfamily 266525
FSH1 superfamily Serine hydrolase (FSH1); This is a family of serine hydrolases. - 125.471 4.13E-32 62 - 298 superfamily 252277
RWD RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The... cl02687 66.1991 1.20E-12 347 - 479 specific 253380
RWD superfamily RWD domain; This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The... - 66.1991 1.20E-12 347 - 479 superfamily 261407

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_3131 PHATRDRAFT_3131 141647 233699 459994 Cre12.g538200.t1.2 Not available 252588

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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