21611 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
21611 chr_3 Peptidase_C1A 214806 216325 + Peptidase_C1A

Synonyms

NCBI ID Ensembl Genomes exon ID
7442465 Thaps21611.3, Thaps21611.2, Thaps21611.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0280

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0075
 0.50

Most Highly Correlated Transcripts

bd1821

(bd1821) NA
0.9635

3148

Peptidase_C1A
0.953

268793

(AMT6) amt
0.8641

31472

S_TKc
0.8464

3936

MFS_1
0.839

24293

hypothetical protein
0.8356

25531

hypothetical protein
0.8277

21824

hypothetical protein
0.8212

25062

PA superfamily
0.8174

32933

hypothetical protein
0.809

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 215.18 2.06E-67 149 - 364 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 215.18 2.06E-67 149 - 364 superfamily 260335
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... cl07031 63.0314 9.41E-13 35 - 94 specific 214853
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 63.0314 9.41E-13 35 - 94 superfamily 263147

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50321 PHATRDRAFT_50321 212895 261843 461333 Not available AT4G11320.1 Not available

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0004197 GO:0006508 GO:0008234 GO:0016946 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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