3148 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3148 chr_3 Peptidase_C1A 246178 247633 - Peptidase_C1A

Synonyms

NCBI ID Ensembl Genomes exon ID
7442474 Thaps3148.1, Thaps3148.3, Thaps3148.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0280

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0075
 0.50

Most Highly Correlated Transcripts

bd1821

(bd1821) NA
0.9635

21611

Peptidase_C1A
0.953

268793

(AMT6) amt
0.8499

25531

hypothetical protein
0.8274

25675

LRR_RI superfamily
0.8185

3936

MFS_1
0.8149

24293

hypothetical protein
0.8127

31472

S_TKc
0.8126

21824

hypothetical protein
0.8106

32933

hypothetical protein
0.7994

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 208.247 1.16E-64 154 - 366 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 208.247 1.16E-64 154 - 366 superfamily 260335
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... cl07031 62.261 1.60E-12 40 - 99 specific 214853
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 62.261 1.60E-12 40 - 99 superfamily 263147

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0008234 GO:0016946 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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