21751 DUF1336 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21751	chr_3	DUF1336 superfamily	952561	958570	-	DUF1336 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448744	Thaps21751.3, Thaps21751.2, Thaps21751.5, Thaps21751.1, Thaps21751.6, Thaps21751.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0166

Most Highly Correlated Transcripts

12836 EEP superfamily 0.9083	24686 hypothetical protein 0.8933	25678 hypothetical protein 0.8854	23120 hypothetical protein 0.8716	24580 hypothetical protein 0.8694	2328 hypothetical protein 0.8655
24627 hypothetical protein 0.8646	35266 (DYN1) DLP_1 0.8623	22857 hypothetical protein 0.8616	24583 Nitro_FMN_reductase superfamily 0.8606

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1336 superfamily		Protein of unknown function (DUF1336); This family represents the C-terminus (approximately 250...	-	99.6882	7.43E-23	1608 - 1807	superfamily	254039

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48806	PHATRDRAFT_48806	Not available	257846	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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