22168 DUF221 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22168 chr_4 DUF221 superfamily 604668 608587 + DUF221 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0408

Most Highly Correlated Transcripts

4556

hypothetical protein
0.9293

24063

COG3899
0.9146

263610

COG3899
0.9085

20915

hypothetical protein
0.9075

7121

DUF3684 superfamily
0.9049

24035

Peptidase_C19 superfamily
0.8969

8576

Ion_trans_2
0.8959

24335

hypothetical protein
0.8946

25600

hypothetical protein
0.8936

8130

hypothetical protein
0.8901

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF221 superfamily Domain of unknown function DUF221; This family consists of hypothetical transmembrane proteins none... - 199.285 3.12E-56 755 - 1080 superfamily 251491
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 104.126 2.73E-25 81 - 309 superfamily 258219
RSN1_TM superfamily Late exocytosis, associated with Golgi transport; This family represents the first three... - 104.126 2.73E-25 81 - 309 superfamily 258219

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43772 PHATRDRAFT_43772 272927 257464 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

Add comment

Log in to post comments