22362 (KCS1) CHS_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22362 chr_4 (KCS1) CHS_like 1565209 1567300 + CHS_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7446159 Thaps22362.3, Thaps22362.1, Thaps22362.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0203
 0.30

Most Highly Correlated Transcripts

bd208

(bd208) DUF3529
0.9644

23291

hypothetical protein
0.9603

bd1474

(bd1474) phytoene_desat
0.9552

bd1306

(bd1306) NA
0.955

270312

hypothetical protein
0.9445

22076

violaxanthin de-epoxidase-like 1
0.9428

24832

hypothetical protein
0.9337

14192

PLN02449
0.9293

bd1403

(bd1403) NA
0.9292

574

PRK05444
0.9267

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes,... cl09938 296.828 4.29E-95 172 - 548 specific 238427
cond_enzymes superfamily Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating)... - 296.828 4.29E-95 172 - 548 superfamily 263929

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26714 PHATRDRAFT_26714 273692 320058 64275 Cre17.g722150.t1.2 AT2G16280.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008415 GO:0009058 GO:0016210 -

GO:0008415

NA

Details: 
NA
GO Category: 
NA

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016210

naringenin-chalcone synthase activity

Details: 
Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.
GO Category: 
MF

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