22437 CTNNBL superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22437	chr_4	CTNNBL superfamily	1977812	1980242	-	CTNNBL superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451350	Thaps22437.1, Thaps22437.2, Thaps22437.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0135

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0080	0.40	0.0016 0.000042

Most Highly Correlated Transcripts

20665 hypothetical protein 0.9187	8535 hypothetical protein 0.917	25162 hypothetical protein 0.9169	24174 DUF1336 superfamily 0.9132	25363 Zw10 superfamily 0.9097	23651 hypothetical protein 0.9067
24212 hypothetical protein 0.9029	261908 PLN02889 0.9008	3694 hypothetical protein 0.8996	23450 hypothetical protein 0.8988

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CTNNBL superfamily		Catenin-beta-like, Arm-motif containing nuclear; CTNNBL is a family of eukaryotic nuclear proteins...	-	82.4007	1.62E-18	117 - 216	superfamily	254667

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45809	PHATRDRAFT_45809	207489	206285	467087	Cre02.g093300.t1.1	AT3G02710.1	257869

KEGG

KEGG description	KEGG Pathway
Spliceosome	map03040

GO Terms

Not available -

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