2247 PLN02369
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2247 chr_2 PLN02369 535261 536760 - PLN02369

Synonyms

NCBI ID Ensembl Genomes exon ID
7448676 Thaps2247.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0288

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0078
 0.42

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.8992

bd258

(bd258) HU
0.8814

268080

NTF2_like superfamily
0.8799

bd208

(bd208) DUF3529
0.8738

24642

PLN02286
0.8708

263987

hypothetical protein
0.8692

9771

hypothetical protein
0.8659

269307

hypothetical protein
0.8625

23954

hypothetical protein
0.8602

3189

hypothetical protein
0.8565

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRTases_typeI Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I... cl00309 83.214 5.64E-19 332 - 459 specific 206754
PRTases_typeI superfamily Phosphoribosyl transferase (PRT)-type I domain; Phosphoribosyl transferase (PRT) domain. The type I... - 83.214 5.64E-19 332 - 459 superfamily 260342
Pribosyltran_N superfamily N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found N-terminal... - 212.274 1.21E-66 182 - 298 superfamily 258077
Pribosyltran_N superfamily N-terminal domain of ribose phosphate pyrophosphokinase; This family is frequently found N-terminal... - 212.274 1.21E-66 182 - 298 superfamily 258077
PLN02369 ribose-phosphate pyrophosphokinase - 476.494 7.76E-167 191 - 499 multi-dom 215209

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32326 PHATRDRAFT_32326 213451 200551 457751 Cre08.g378850.t1.2 AT2G35390.1 257610

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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