22848 COG4251
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22848 chr_5 COG4251 1711865 1715953 - COG4251
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0077
Normalized Mean Residue
Thaps_bicluster_0086
0.47
hypothetical protein
0.9676
hypothetical protein
0.9012
hypothetical protein
0.8795
UxaC
0.8794
(bd392) DEXDc
0.8776
hypothetical protein
0.8772
AAA_34 superfamily
0.8764
hypothetical protein
0.8722
RIO superfamily
0.8722
GlcNAc superfamily
0.8695
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 77.3018 1.42E-16 755 - 894 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 77.3018 1.42E-16 755 - 894 superfamily 260175
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 74.5345 1.70E-15 941 - 1063 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 74.5345 1.70E-15 941 - 1063 superfamily 267431
COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction... - 255.053 4.25E-72 17 - 909 multi-dom 226702
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54330 PHATRDRAFT_54330 166002 292205 Not available Cre07.g329900.t1.1 AT5G10720.1 360571
KEGG description KEGG Pathway
Not available Not available
GO:0003676 GO:0006355 GO:0008020 GO:0000156 GO:0000160 GO:0003677 GO:0005524 GO:0000155 GO:0007165 GO:0016020 GO:0016310 GO:0016772 GO:0006468 GO:0016301 GO:0004673 GO:0016775 GO:0018110 -

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

G-protein coupled photoreceptor activity

Details: 
Combining with incidental electromagnetic radiation, particularly visible light, and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.
GO Category: 
MF

phosphorelay response regulator activity

Details: 
Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.
GO Category: 
MF

phosphorelay signal transduction system

Details: 
A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

phosphorelay sensor kinase activity

Details: 
Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO Category: 
MF

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

phosphorylation

Details: 
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO Category: 
BP

transferase activity, transferring phosphorus-containing groups

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO Category: 
MF

protein phosphorylation

Details: 
The process of introducing a phosphate group on to a protein.
GO Category: 
BP

kinase activity

Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
GO Category: 
MF

protein histidine kinase activity

Details: 
Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine.
GO Category: 
MF

phosphotransferase activity, nitrogenous group as acceptor

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).
GO Category: 
MF

histone arginine kinase activity

Details: 
Catalysis of the reaction: histone L-arginine + ATP = histone N(omega)-phospho-L-arginine + ADP + 2 H(+).
GO Category: 
MF
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