23115 UBCc superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
23115 chr_6 UBCc superfamily 961986 965012 + UBCc superfamily
NCBI ID Ensembl Genomes exon ID
7445948 Thaps23115.1, Thaps23115.3, Thaps23115.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0435
(bd1841) CAP10 superfamily
0.9029
(bd1786) GLTP superfamily
0.8899
hypothetical protein
0.8888
(bd1808) NA
0.884
(bd415) arom_aa_hydroxylase superfamily
0.8782
(bd410) HNHc
0.8762
UBQ superfamily
0.8705
EEP superfamily
0.8705
Nitro_FMN_reductase superfamily
0.8665
(bd1793) NA
0.8659
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 88.4133 1.22E-20 324 - 445 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48512 PHATRDRAFT_48512 235766 292645 466615 Not available Not available Not available
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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