23331 RAP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23331 chr_7 RAP 21083 25524 - RAP

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

10053

hypothetical protein
0.9182

5666

Las1 superfamily
0.8948

21682

SrmB
0.8936

37786

SrmB
0.8881

40884

(RPA1) RNAP_I_RPA1_N
0.8793

24015

Urb2 superfamily
0.8792

23513

COG1258
0.8755

21173

hypothetical protein
0.8746

268130

hypothetical protein
0.8708

25539

hypothetical protein
0.8665

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RAP RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... cl17746 66.8271 3.47E-13 1242 - 1303 specific 254762
RAP superfamily RAP domain; This domain is found in various eukaryotic species, where it is found in proteins that... - 66.8271 3.47E-13 1242 - 1303 superfamily 266808

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48672 PHATRDRAFT_48672 182311 64177 243605 Not available AT2G31890.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0031177 -

GO:0031177

phosphopantetheine binding

Details: 
Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate).
GO Category: 
MF

Add comment

Log in to post comments