5666 Las1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5666 chr_5 Las1 superfamily 1770446 1773007 + Las1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445218 Thaps5666.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0188
 0.22

Most Highly Correlated Transcripts

bd1945

(bd1945) NA
0.9609

3858

PTZ00141
0.9298

25120

U3_assoc_6 superfamily
0.921

25434

PRK00142
0.9182

22441

hypothetical protein
0.9121

24015

Urb2 superfamily
0.9066

23336

SRP40_C superfamily
0.9057

268486

Glyco_transf_22 superfamily
0.9038

14890

Cupin_8 superfamily
0.9038

23061

hypothetical protein
0.9028

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Las1 superfamily Las1-like; Las1 is an essential nuclear protein involved in cell morphogenesis and cell surface... - 86.9451 1.40E-19 119 - 327 superfamily 252327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43579 PHATRDRAFT_43579 261647 237155 Not available Not available Not available 553315

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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