10787 P4Hc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10787 chr_18 P4Hc 108354 110054 - P4Hc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0353

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0003
 0.47

Most Highly Correlated Transcripts

4108

hypothetical protein
0.7591

263864

0.7289

bd1155

(bd1155) GCS superfamily
0.7102

262191

RNase_HI_RT_Ty1
0.6623

264010

P4Hc
0.6325

bd1772

(bd1772) NA
0.6211

bd1823

(bd1823) SCP superfamily
0.6158

bd453

(bd453) Mito_carr
0.608

10747

hypothetical protein
0.606

bd885

(bd885) NA
0.5987

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
P4Hc Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen... cl17304 107.859 8.82E-28 257 - 438 specific 214780
2OG-FeII_Oxy_3 superfamily 2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(... - 107.859 8.82E-28 257 - 438 superfamily 266616

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48891 PHATRDRAFT_48891 206670 243855 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0016706 GO:0019538 -

GO:0016706

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Details: 
Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.
GO Category: 
MF

GO:0019538

protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO Category: 
BP

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