23728 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23728 chr_8 WD40 superfamily 425167 427390 + WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450142 Thaps23728.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0174

Most Highly Correlated Transcripts

bd393

(bd393) nst superfamily
0.9483

6693

hypothetical protein
0.9253

38331

YIP1 superfamily
0.924

264492

Peptidase_C1A
0.9211

16295

FBPase
0.9186

261400

NA
0.9148

31598

cyclophilin superfamily
0.912

4353

O-FucT_like
0.9118

2488

hypothetical protein
0.9076

4292

hypothetical protein
0.9075

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 92.7832 7.24E-21 404 - 709 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 92.7832 7.24E-21 404 - 709 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 81.6735 1.55E-16 59 - 652 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48381 PHATRDRAFT_48381 185021 260507 432527 Not available AT2G01330.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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