23922 (Tp_AP2-EREBP9) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23922 chr_9 (Tp_AP2-EREBP9) regulator [Rayko] 188591 193238 - regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7445003 Thaps23922.2, Thaps23922.3, Thaps23922.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0184
 0.33

Most Highly Correlated Transcripts

41953

RtcB
0.887

263644

(TopoII_2) PLN03128
0.886

269893

TOPRIM_DnaG_primases
0.8855

35726

COG1204
0.8782

23898

NADB_Rossmann superfamily
0.8779

23969

hypothetical protein
0.8727

3009

hypothetical protein
0.8715

22728

hypothetical protein
0.8696

268746

SXM1
0.8611

24867

hypothetical protein
0.8599

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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