24096 Aa_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24096 chr_10 Aa_trans superfamily 62897 64913 - Aa_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450794 Thaps24096.2, Thaps24096.3, Thaps24096.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0400

Most Highly Correlated Transcripts

3408

FANCL_C superfamily
0.9095

4565

hypothetical protein
0.9094

10479

hypothetical protein
0.9076

12836

EEP superfamily
0.907

23484

MPP_ASMase
0.8972

25619

hypothetical protein
0.8948

11617

hypothetical protein
0.8948

21119

hypothetical protein
0.8947

264655

COG3899
0.8913

22153

DnaJ
0.8911

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aa_trans superfamily Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid... - 123.177 1.10E-30 106 - 462 superfamily 266708

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49278 PHATRDRAFT_49278 224248 213605 Not available Not available Not available 509419

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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