24275 Ctr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24275 chr_11a Ctr 66327 68695 + Ctr

Synonyms

NCBI ID Ensembl Genomes exon ID
7444518 Thaps24275.1, Thaps24275.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0284

Most Highly Correlated Transcripts

24525

hypothetical protein
0.9038

268443

SAICAR_synt_Sc
0.9007

36007

Aldolase_II superfamily
0.8989

30701

PRK05279
0.8929

35136

NA
0.887

4524

DHQS
0.8817

267979

HCO3_cotransp superfamily
0.8794

36995

LplA
0.877

23550

hypothetical protein
0.8752

19158

GRX_PICOT_like
0.8738

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ctr superfamily Ctr copper transporter family; The redox active metal copper is an essential cofactor in critical... - 83.8845 1.11E-18 538 - 652 superfamily 252408
Ctr superfamily Ctr copper transporter family; The redox active metal copper is an essential cofactor in critical... - 83.8845 1.11E-18 538 - 652 superfamily 252408

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47805 PHATRDRAFT_47805 255983 66314 449972 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005375 GO:0006825 GO:0016021 -

GO:0005375

copper ion transmembrane transporter activity

Details: 
Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other.
GO Category: 
MF

GO:0006825

copper ion transport

Details: 
The directed movement of copper (Cu) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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