10867 GH43_62_32_68 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10867	chr_18	GH43_62_32_68 superfamily	329446	335080	+	GH43_62_32_68 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444261	Thaps10867.1, Thaps10867.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0195

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0035	0.44

Most Highly Correlated Transcripts

bd1662 (bd1662) TIGR00367 0.8602	bd1150 (bd1150) PLN02433 0.8386	264064 SbcC 0.8356	25297 Chorein_N 0.8323	5409 hypothetical protein 0.8307	22245 hypothetical protein 0.8182
7440 hypothetical protein 0.8127	5410 hypothetical protein 0.8118	6592 TroA-like superfamily 0.8108	bd176 (bd176) PP2Cc 0.8032

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GH43_62_32_68 superfamily		Glycosyl hydrolase families: GH43, GH62, GH32, GH68; Members of the glycosyl hydrolase families 32...	-	131.994	2.33E-33	1455 - 1583	superfamily	265439

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	529535

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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