25350 Methyltransf_24Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25350	chr_18	Methyltransf_24	309568	311473	+	Methyltransf_24

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444255	Thaps25350.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0438

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0060	0.47	0.0000000027 0.00038

Most Highly Correlated Transcripts

25535 hypothetical protein 0.9274	23170 hypothetical protein 0.9161	2732 Cyclophilin_PPIL3_like 0.9149	7696 2_5_RNA_ligase2 0.9143	5921 hypothetical protein 0.9125	25338 hypothetical protein 0.9055
270222 0.9053	268830 CAP10 superfamily 0.9038	10963 hypothetical protein 0.9035	5922 hypothetical protein 0.9013

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltransf_24		Methyltransferase domain; This family appears to be a methyltransferase domain.	cl17173	73.082	1.74E-15	436 - 547	specific	257894
AdoMet_MTases superfamily		S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases...	-	73.082	1.74E-15	436 - 547	superfamily	266528

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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