25434 PRK00142
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25434 chr_18 PRK00142 767635 770232 - PRK00142

Synonyms

NCBI ID Ensembl Genomes exon ID
7450904 Thaps25434.1, Thaps25434.4, Thaps25434.3, Thaps25434.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0195
 0.28

Most Highly Correlated Transcripts

25436

hypothetical protein
0.9356

40884

(RPA1) RNAP_I_RPA1_N
0.9338

23336

SRP40_C superfamily
0.9337

25120

U3_assoc_6 superfamily
0.9261

268130

hypothetical protein
0.9252

29018

NMD3
0.9235

262091

eukaryotic translation initiation factor 3, subunit 10
0.9212

22441

hypothetical protein
0.9206

21245

MPP_superfamily superfamily
0.9202

5666

Las1 superfamily
0.9182

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RHOD superfamily Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese... - 116.91 1.12E-30 337 - 473 superfamily 260205
PRK00142 putative rhodanese-related sulfurtransferase; Provisional - 155.005 6.15E-42 160 - 598 multi-dom 234663

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44443 PHATRDRAFT_44443 189106 202126 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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