2557 Cupin_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2557 chr_2 Cupin_8 superfamily 1284064 1285274 + Cupin_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7444691 Thaps2557.3, Thaps2557.2, Thaps2557.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0181
 0.40

Most Highly Correlated Transcripts

270222

0.9063

7249

(ARF5) Ras_like_GTPase superfamily
0.9047

39278

ATP-synt_C
0.8955

269624

TIM_phosphate_binding superfamily
0.8952

11479

hypothetical protein
0.8913

20405

GRX_GRXh_1_2_like
0.8899

6243

Macro superfamily
0.8879

1842

hypothetical protein
0.8862

18091

Peptidase_S9 superfamily
0.8846

2669

MmsB
0.8823

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cupin_8 superfamily Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. - 61.5971 2.20E-11 78 - 319 superfamily 267658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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