11039 TLDThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11039	chr_18	TLD	765761	767542	+	TLD

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444839	Thaps11039.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0333

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0158	0.37	0.012 380

Most Highly Correlated Transcripts

bd804 (bd804) alpha-crystallin-Hsps_p23-like superfamily 0.8017	4108 hypothetical protein 0.7775	3784 hypothetical protein 0.7155	6638 ANK 0.7083	8934 hypothetical protein 0.7062	bd1182 (bd1182) Aldo_ket_red 0.7014
32716 PRK05290 0.6964	bd933 (bd933) NA 0.6959	4062 hypothetical protein 0.6894	1308 ANK 0.687

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TLD		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	cl02144	84.9901	2.29E-19	198 - 337	specific	254268
TLD superfamily		TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&...	-	84.9901	2.29E-19	198 - 337	superfamily	261195

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	249911	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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