25698 IFRD superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25698 chr_22 IFRD superfamily 224594 226174 + IFRD superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442797 Thaps25698.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0286

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0007
 0.40

Most Highly Correlated Transcripts

24395

MIF4G_like superfamily
0.8391

bd630

(bd630) NA
0.8372

bd812

(bd812) NA
0.8216

bd771

(bd771) NA
0.8109

bd1237

(bd1237) 3a01204
0.8068

bd816

(bd816) NA
0.8023

bd1748

(bd1748) NA
0.7954

38139

Chloroa_b-bind
0.7935

bd1875

(bd1875) NA
0.784

bd692

(bd692) NA
0.7837

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IFRD superfamily Interferon-related developmental regulator (IFRD); Interferon-related developmental regulator (... - 83.6907 3.79E-18 87 - 394 superfamily 252938

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46417 PHATRDRAFT_46417 247140 62777 Not available Not available AT1G27760.3 480720

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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